fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G18550 (HB-2, ATHB21)

Alias HB-2, ATHB21
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / ATHB-2
AtTFDBHomeobox / HD-Zip I
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description homeobox-2, homeobox protein 21 (.1)
TAIR annotation Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. (.1)
Gene model
Gene model cDNA support
AT2G18550.1 12
Entry clone (w/o stop) RE_01G11
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1 2
rice
sorghum
physcomitrella
Total 2 2 4
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        —cA•¨ŠúF‰è¶‚¦”½‚è•Ô‚è‘å(18/81), –{—tF×’·‚­ã•Î¶’·‹­(18/73), ‰ÔF‘gD‚ÌŒ`¬ˆÊ’u‚΂ç‚΂ç(37/73), ‰ÔŒsF—Z‡(19/73), dwarf(12/73), ’¸‰Ô—Z‡(16/73), ‘ç‚«(23/73), (phenotype_A20097:leaf_ã•Î¶’·‹­/flower_‘gDŒ`¬ˆÊ’u‚΂ç‚΂ç/silique_‚²‚‚²‚Â/stem_dwarf/’¸‰Ô—Z‡/‘ç‚«/•s–«/’¸‰è—D¨Žã/‰ÔŒs—Z‡)(phenotype_A20098:leaf_ã•Î¶’·‹­/flower_‘gDŒ`¬ˆÊ’u‚΂ç‚΂ç/stem_dwarf/’¸‰Ô—Z‡/‘ç‚«/’¸‰è—D¨Žã/‰ÔŒs—Z‡)

         abnormal flower (direct input, A20097, A20098), 
         abnormal shaped silique (A20097), 
         loss of apical dominance (A20097, A20098), 
         dwarf (A20098), 
         early flowering (direct input, A20097, A20098), 
         sterile or low fertility (A20097), 
         fused stem (A20097, A20098), 
         abnormal leaf (A20097, A20098)


 and more...        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         abnormal flower, 
         early flowering 
         (A20902-176)
         

         abnormal carpel, 
         abnormal flower, 
         dwarf 
         (A20902-183)
         

         abnormal petal, 
         abnormal sepal, 
         short pedicel, 
         abnormal carpel 
         (A20901-140)
         


        		
       

       

        Phenotype in ornamental plants


        
         

          Comment