Alias |
ANAC046 |
TF Classification |
FioreDB | NAC (Click to show phylogenetic tree) |
RARTF | NAC / CUP-SHAPED COTYLEDON2 |
AtTFDB | NAC |
PlnTFDB | NAC (v3.0), NAC (v1.0) |
DATF | NAC |
|
TAIR short description |
NAC domain containing protein 46 (.1) |
TAIR annotation |
NAC domain containing protein 46 (NAC046); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 87 (TAIR:AT5G18270.1); Has 3018 Blast hits to 3013 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3018; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_0618 |
External link |
|
Gene Ontology (GO) |
(P) 1900057: developmental processes |
->positive regulation of leaf senescence |
(P) 1903648: other metabolic processes |
->positive regulation of chlorophyll catabolic process |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(P) 7275: developmental processes |
->multicellular organism development |
(F) 975: nucleic acid binding |
->regulatory region DNA binding |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
|
1 |
2 |
3 |
soybean |
|
|
1 |
6 |
7 |
rice |
1 |
|
|
|
1 |
sorghum |
|
|
|
|
|
physcomitrella |
|
|
|
|
|
Total |
1 |
|
2 |
8 |
11 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
View all photo |
curled leaf
fasciated stem (direct input),
abnormal leaf (direct input),
abnormal sepal (direct input)
   |
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
ID80 |
Gentiana |
AtACT2pro:AtCDS-SRDX |
2006-03-30 |
  |
no phenotype  |
  |
|
Comment |
|