Alias
NF-YA2, ATHAP2B, HAP2B, UNE8
TF Classification
TAIR short description
UNFERTILIZED EMBRYO SAC 8, "nuclear factor Y, subunit A2", HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 2B, HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 2B, nuclear factor Y, subunit A2 (.1)
TAIR annotation
Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. (.1)
Gene model
Entry clone (w/o stop)
RE_02B01
External link
Gene Ontology (GO)
(C) 16602: other intracellular components
->CCAAT-binding factor complex
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent
->regulation of transcription, DNA-templated
(P) 9567: other biological processes
->double fertilization forming a zygote and endosperm
miRNA/tasiRNA
Target sequence
miRNA/tasiRNA sequence
Map
5'--3'
miR169d: 3'-GCCGTTCAGTAGGAACCGAGT-5'
5'--3'
miR169e: 3'-GCCGTTCAGTAGGAACCGAGT-5'
5'--3'
miR169f: 3'-GCCGTTCAGTAGGAACCGAGT-5'
5'--3'
miR169g: 3'-GCCGTTCAGTAGGAACCGAGT-5'
5'--3'
miR169h: 3'-GTCCGTTCAGTAGGAACCGAT-5'
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
1
soybean
rice
sorghum
1
1
physcomitrella
Total
2
2
Repression motif
Repression motif in putative orthologs
LGNVMKLGLGL X at 357/363 in sorghum Sb031929 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment