fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G12680 (HUA1)

Alias HUA1
TF Classification
FioreDBC3HZnF (Click to show phylogenetic tree)
RARTFC3H-type 1(Zn) / putative zinc finger protein
AtTFDB
PlnTFDBC3H (v3.0), C3H (v1.0)
DATFC3H
TAIR short description ENHANCER OF AG-4 1, floral homeotic protein (HUA1) (.1)
TAIR annotation Member of the floral homeotic AGAMOUS pathway. (.1)
Gene model
Gene model cDNA support
AT3G12680.1 11
Entry clone (w/o stop) RE_0670_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(C) 16607: other intracellular components ->nuclear speck
(P) 1709: other cellular processes ->cell fate determination
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3723: DNA or RNA binding ->RNA binding
(F) 3730: DNA or RNA binding ->mRNA 3-UTR binding
(F) 46872: other binding ->metal ion binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5829: cytosol ->cytosol
(P) 61158: other metabolic processes ->3-UTR-mediated mRNA destabilization
(P) 6397: other cellular processes ->mRNA processing
(P) 9908: developmental processes ->flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1
rice 1 1 2
sorghum 1 1
physcomitrella
Total 3 1 2 6
Repression motif 
SSNTANLNLGLVTPAT at 388/524 in AT3G12680.1
Repression motif
in putative orthologs		 
NRTVSCLMLSLSCWES at 845/1091 in sorghum Sb025428 (Type Ib)
NRTVSCLMLSLSCWES at 1002/1091 in sorghum Sb025428 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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