fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G48160 (E2FE, E2L3, DEL1)

Alias E2FE, E2L3, DEL1
TF Classification
FioreDBE2F_DP (Click to show phylogenetic tree)
RARTFE2F/DP
AtTFDBE2F-DP
PlnTFDBE2F-DP (v3.0), E2F-DP (v1.0)
DATFE2F-DP
TAIR short description E2F-LIKE 3, DP-E2F-like 1 (.1.2)
TAIR annotation E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle. (.1), E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle. (.2)
Gene model
Gene model cDNA support
AT3G48160.2 6
AT3G48160.1 3
Entry clone (w/o stop) RE_1114_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 32876: other metabolic processes ->negative regulation of DNA endoreduplication
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 42023: other metabolic processes ->DNA endoreduplication
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5667: other intracellular components ->transcription factor complex
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR5021: 3'-GAGAAAAGAAGAAGAAGAAG-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1 2
rice 1 1
sorghum 1 1
physcomitrella 1 1
Total 4 1 1 1 7
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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