Alias |
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TF Classification |
FioreDB | C3HZnF (Click to show phylogenetic tree) |
RARTF | |
AtTFDB | |
PlnTFDB | C3H (v3.0), C3H (v1.0) |
DATF | C3H |
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TAIR short description |
Transducin/WD40 repeat-like superfamily protein (.1.2) |
TAIR annotation |
Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: zinc finger WD40 repeat protein 1 (TAIR:AT4G25440.1); Has 29363 Blast hits to 16060 proteins in 578 species: Archae - 38; Bacteria - 4405; Metazoa - 10853; Fungi - 6886; Plants - 3443; Viruses - 0; Other Eukaryotes - 3738 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
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External link |
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Gene Ontology (GO) |
(F) 3676: nucleic acid binding |
->nucleic acid binding |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3729: DNA or RNA binding |
->mRNA binding |
(F) 46872: other binding |
->metal ion binding |
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miRNA/tasiRNA |
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Orthologs |
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Repression motif |
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Repression motif in putative orthologs |
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Status |
Plasmid construction | -> not_yet |
Plasmid construction | -> not_yet |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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