Alias |
OBP4, AtDof5. 4 |
TF Classification |
|
TAIR short description |
OBF binding protein 4 (.1) |
TAIR annotation |
Encodes a zinc finger protein. (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_0490 |
External link |
|
Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 44212: nucleic acid binding |
->transcription regulatory region DNA binding |
(F) 46872: other binding |
->metal ion binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
|
miRNA/tasiRNA |
Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
miRN139: 3'-TGAAGATGTTCTTGACAGCAT-5' |
|
|
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
1 |
|
|
1 |
soybean |
|
1 |
|
|
1 |
rice |
|
1 |
|
|
1 |
sorghum |
|
|
|
|
|
physcomitrella |
|
|
|
|
|
Total |
|
3 |
|
|
3 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
|
abnormal stem (direct input),
slow growth (direct input),
adventitious shoot formation (direct input),
pollen defective (direct input),
too many rosettes (direct input),
narrow leaf (direct input),
long petiole (direct input),
abnormal petal (direct input),
short stamen (direct input),
non-rosette growth (direct input),
abnormal carpel (direct input),
late flowering (direct input),
abnormal flower (direct input),
abnormal seedling (direct input)
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
too many rosettes
(A20263-32)
abnormal leaf
(A20266-175)
late flowering,
long petiole
(A20265-150)
late flowering,
long petiole
(A20265-146)
late flowering,
too many rosettes
(A20586-174)
long petiole
(A20265-151)
slow growth,
short petiole
(A20584-52)
narrow leaf
(A20211-203)
non-rosette growth,
abnormal leaf
(A20215-252)
late flowering,
long petiole
(A20265-145)
late flowering,
long petiole
(A20265-149)
|
Phenotype in ornamental plants
|
|
Comment |
|