fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G20900 (ORE7, AHL27, ESC)

Alias ORE7, AHL27, ESC
TF Classification
FioreDBAT-hook (Click to show phylogenetic tree)
RARTFAT-hook
AtTFDB
PlnTFDB
DATF
TAIR short description ORESARA 7, ESCAROLA, AT-hook motif nuclear-localized protein 27, Predicted AT-hook DNA-binding family protein (.1)
TAIR annotation Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light. (.1)
Gene model
Gene model cDNA support
AT1G20900.1 16
Entry clone (w/o stop) IE_06C05
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10150: developmental processes ->leaf senescence
(P) 10228: developmental processes ->vegetative to reproductive phase transition of meristem
(F) 3680: DNA or RNA binding ->AT DNA binding
(F) 3690: DNA or RNA binding ->double-stranded DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42393: protein binding ->histone binding
(F) 43621: protein binding ->protein self-association
(P) 45087: response to stress ->innate immune response
(P) 45824: response to stress ->negative regulation of innate immune response
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 6325: cell organization and biogenesis ->chromatin organization
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9640: developmental processes ->photomorphogenesis
(P) 9908: developmental processes ->flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean
rice
sorghum
physcomitrella
Total 1 1 2
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> The work interrupted(07Feb)

          
Plasmid construction -> The work interrupted(07Feb)

          
Transformed -> not_yet

          
T1 seed harvested -> not_yet

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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