fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G66380 (ATMYB114)

Alias ATMYB114
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / ATR1
AtTFDBMYB / R2R3-MYBs
PlnTFDBMYB (v3.0), MYB (v1.0)
DATFMYB
TAIR short description myb domain protein 114 (.1)
TAIR annotation Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis (.1)
Gene model
Gene model cDNA support
AT1G66380.1 5
Entry clone (w/o stop) RE_1354
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 30154: other cellular processes ->cell differentiation
(P) 31540: other metabolic processes ->regulation of anthocyanin biosynthetic process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 6357: other cellular processes ->regulation of transcription from RNA polymerase II promoter
(P) 7275: developmental processes ->multicellular organism development
(P) 9753: other biological processes ->response to jasmonic acid
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 2 154 156
soybean 1 2 198 201
rice 1 78 79
sorghum 1 74 75
physcomitrella 1 31 32
Total 1 7 535 543
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
SCALPDLNLDLSICEK at 160/218 in soybean Gm053532 (Type III)
EPRCPDLNLELSVGPT at 197/260 in rice Os021729 (Type III)
GEKCQELNLELRICPP at 177/254 in poplar Pt000909 (Type III)
QERCPDLNLELRISLP at 186/268 in poplar Pt018632 (Type III)
SFPHHQLNLDLSIGLP at 203/301 in soybean Gm015390 (Type III)
LLLLHQLQLQLSIIIA at 182/382 in soybean Gm035059 (Type III)
RLLSFSLSLSLFIVSP at 14/367 in soybean Gm025799 (Type III)
PTSLPTLILFR at 239/244 in poplar Pt003372 (Type III)
HHHRPGLNLMLQQHTS at 140/353 in sorghum Sb013500 (Type III)
APRCPDLNLDLDLSVG at 194/269 in sorghum Sb009095 (Type III)
PCALPDLNLDLSITNP at 186/255 in soybean Gm019076 (Type III)
SSSINIDLNIAAPASPGH at 200/245 in poplar Pt019483 (Type III)
PSSLPTLLLFR at 240/245 in poplar Pt019483 (Type III)
QCTLPDLNLDLTMSIP at 182/226 in poplar Pt034304 (Type III)
VVGGIDLNLSLSPPTS at 196/215 in sorghum Sb016715 (Type III)
SSSDINLDLTLSIPSK at 167/185 in poplar Pt027434 (Type III)
LERCPDLNLELTISPP at 140/210 in soybean Gm008427 (Type III)
QERCPDLNLELGISLP at 189/271 in poplar Pt021128 (Type III)
VHPNHKLNLELSIGLP at 220/318 in poplar Pt012921 (Type III)
VPRCPDLNLDLCISPP at 216/452 in sorghum Sb031046 (Type III)
QSEDEMDLRRGPWTVDE at 23/341 in soybean Gm042133 (Type III)
LERCPDLNLELTISPP at 133/203 in soybean Gm008428 (Type III)
LERCPDLNLELTISPP at 170/246 in soybean Gm030520 (Type III)
LERCPDLNLELTISPP at 173/253 in soybean Gm032581 (Type III)
PVSNASLKLELPSCQS at 305/569 in physcomitrella Pp001871 (Type III)
EPRCPDLNLELSVGPT at 197/260 in rice Os021728 (Type III)
APRCPDLNLDLDLDLS at 205/287 in rice Os004951 (Type III)
SSEDEMDLRRGPWTVDE at 19/325 in soybean Gm019269 (Type III)
QLQLQALALSLCSNGL at 12/515 in sorghum Sb025666 (Type III)
GAMDEELGLALAGPPS at 259/351 in sorghum Sb020839 (Type III)
SVPHHQLNLDLSIGLP at 210/302 in soybean Gm010386 (Type III)
QSEDEMDLRRGPWTVDE at 24/340 in soybean Gm023935 (Type III)
GEKCQELNLELRICPP at 168/245 in poplar Pt000910 (Type III)
HERCPDLNLELTISPP at 157/235 in soybean Gm013657 (Type III)
PLKCPDLNLDLCISLP at 189/251 in rice Os034636 (Type III)
QERCPDLNLELRISLP at 186/266 in poplar Pt018633 (Type III)
WCACMHLSLSLLLDLI at 405/513 in sorghum Sb030489 (Type III)
YPPEVQLHLALSKRCR at 158/369 in sorghum Sb000853 (Type III)
HERCPDLNLELTISPP at 150/228 in soybean Gm013658 (Type III)
PPKCPDLNLDLCISPP at 161/243 in rice Os032444 (Type III)
SCALPDLNLDLTARFH at 182/221 in poplar Pt041257 (Type III)
SCEDEMDLRRGPWTVDE at 19/322 in soybean Gm045910 (Type III)
LFPQGLDLQSMDPNTPWN at 282/322 in soybean Gm045910 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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