fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G20550 (DDL)

Alias DDL
TF Classification
FioreDBFHA (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDBFHA (v3.0), FHA (v1.0)
DATFFHA
TAIR short description DAWDLE, SMAD/FHA domain-containing protein (.1)
TAIR annotation Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL. (.1)
Gene model
Gene model cDNA support
AT3G20550.1 24
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 35196: other cellular processes ->production of miRNAs involved in gene silencing by miRNA
(F) 3723: DNA or RNA binding ->RNA binding
(F) 3729: DNA or RNA binding ->mRNA binding
(P) 48638: other biological processes ->regulation of developmental growth
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5829: cytosol ->cytosol
(P) 8283: other biological processes ->cell proliferation
(C) 9507: chloroplast ->chloroplast
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 2 3
rice
sorghum 1 1
physcomitrella 1 1
Total 4 2 6
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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