fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G26790 (FUS3)

Alias FUS3
TF Classification
FioreDBB3 (Click to show phylogenetic tree)
RARTFABI3/VP1 / FUSCA3
AtTFDBABI3VP1
PlnTFDBABI3VP1 (v3.0), ABI3VP1 (v1.0)
DATFABI3-VP1
TAIR short description FUSCA 3, AP2/B3-like transcriptional factor family protein (.1)
TAIR annotation Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif (DNA motif CATGCA(TG)), present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed. (.1)
Gene model
Gene model cDNA support
AT3G26790.1 14
Entry clone (w/o stop) IE_08E04
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10116: other cellular processes ->positive regulation of abscisic acid biosynthetic process
(P) 10262: developmental processes ->somatic embryogenesis
(P) 10373: other metabolic processes ->negative regulation of gibberellin biosynthetic process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 8284: other cellular processes ->positive regulation of cell proliferation
(P) 9733: other biological processes ->response to auxin
(P) 9793: developmental processes ->embryo development ending in seed dormancy
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1 2
rice 1 1
sorghum
physcomitrella
Total 2 1 2 5
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

         abnormal seedling (direct input), 
         bushy (direct input), 
         embryonic lethal (direct input), 
         dwarf (direct input), 
         wide leaf (direct input)
        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

          Comment