fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G47870 (ASL29, SCP, LBD27)

Alias ASL29, SCP, LBD27
TF Classification
FioreDBAS2 (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDBLOB (v3.0)
DATFAS2
TAIR short description SIDECAR POLLEN, ASYMMETRIC LEAVES 2-like 29, LOB domain-containing protein 27 (.1)
TAIR annotation Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation. (.1)
Gene model
Gene model cDNA support
AT3G47870.1 3
Entry clone (w/o stop) IE_0040
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 9555: developmental processes ->pollen development
(P) 9556: other cellular processes ->microsporogenesis
(P) 9786: other cellular processes ->regulation of asymmetric cell division
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean
rice
sorghum 1 1
physcomitrella
Total 2 2
Repression motif 
FQNVHRLFGVRSIVK at 69/328 in AT3G47870.1
Repression motif
in putative orthologs		 
FRSAHRLFGVSNILK at 50/282 in sorghum Sb017751 (Type Ib)
FQNAHKLFGVRKILR at 44/269 in poplar Pt023892 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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