| Alias |
BP1, KNAT1 |
| TF Classification |
| FioreDB | HD (Click to show phylogenetic tree) |
| RARTF | HB / SHOOTMERISTEMLESS |
| AtTFDB | Homeobox / KNOX I |
| PlnTFDB | HB (v3.0), HB (v1.0) |
| DATF | HB |
|
| TAIR short description |
BREVIPEDICELLUS 1, BREVIPEDICELLUS, KNOTTED-like from Arabidopsis thaliana (.1) |
| TAIR annotation |
A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate. (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
IE_0093 |
| External link |
|
| Gene Ontology (GO) |
| (P) 10051: developmental processes |
->xylem and phloem pattern formation |
| (P) 10089: other biological processes |
->xylem development |
| (P) 1708: other cellular processes |
->cell fate specification |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
| (P) 45165: other cellular processes |
->cell fate commitment |
| (F) 5515: protein binding |
->protein binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
1 |
|
|
|
1 |
| soybean |
1 |
|
2 |
|
3 |
| rice |
1 |
|
|
|
1 |
| sorghum |
1 |
|
1 |
|
2 |
| physcomitrella |
|
|
|
|
|
| Total |
4 |
|
3 |
|
7 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
View all photo |
sterile or low fertility (A20157, A20164),
early flowering (A20157, A20164),
abnormal shaped leaf (direct input, A20157, A20164),
aerial rosette (A20157, A20164),
abnormal flower (direct input, A20157, A20164),
abnormal leaf (A20157),
short pedicel (direct input, A20164),
abnormal stem (A20164),
meristem-less (direct input)
    |
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
abnormal silique
(A20327-118)
|
Phenotype in ornamental plants
|
| ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
| ID50095 |
Torenia |
35S:AtCDS-SRDX |
2008-10-01 |
development bulk, 10 of 17 lines |
expansion of the violet colored region of lips
[Publication link] |
 |
|
| Comment |
|
