Alias |
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TF Classification |
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TAIR short description |
Integrase-type DNA-binding superfamily protein (.1.2.3) |
TAIR annotation |
Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); Has 251 Blast hits to 241 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 219; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
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External link |
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Gene Ontology (GO) |
(P) 10337: other metabolic processes |
->regulation of salicylic acid metabolic process |
(C) 16021: other membranes |
->integral component of membrane |
(P) 1900426: response to abiotic or biotic stimulus |
->positive regulation of defense response to bacterium |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
(P) 7275: developmental processes |
->multicellular organism development |
(P) 9873: other cellular processes |
->ethylene-activated signaling pathway |
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miRNA/tasiRNA |
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Orthologs |
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Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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soybean |
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rice |
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sorghum |
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physcomitrella |
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1 |
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1 |
Total |
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1 |
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1 |
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Repression motif |
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Repression motif in putative orthologs |
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Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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