fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G08790 (ATAF2, ANAC081)

Alias ATAF2, ANAC081
TF Classification
FioreDBNAC (Click to show phylogenetic tree)
RARTFNAC / CUP-SHAPED COTYLEDON2
AtTFDBNAC
PlnTFDBNAC (v3.0), NAC (v1.0)
DATFNAC
TAIR short description Arabidopsis NAC domain containing protein 81, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)
TAIR annotation induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain. (.1)
Gene model
Gene model cDNA support
AT5G08790.1 173
Entry clone (w/o stop) RE_0645
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10099: response to abiotic or biotic stimulus ->regulation of photomorphogenesis
(P) 10150: developmental processes ->leaf senescence
(P) 16032: other biological processes ->viral process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 43424: protein binding ->protein histidine kinase binding
(P) 45892: transcription,DNA-dependent ->negative regulation of transcription, DNA-templated
(P) 45893: other metabolic processes ->positive regulation of transcription, DNA-templated
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 7275: developmental processes ->multicellular organism development
(P) 8361: cell organization and biogenesis ->regulation of cell size
(P) 9416: response to abiotic or biotic stimulus ->response to light stimulus
(P) 9611: response to stress ->response to wounding
(P) 9620: response to abiotic or biotic stimulus ->response to fungus
(P) 9744: other biological processes ->response to sucrose
(P) 9751: other biological processes ->response to salicylic acid
(P) 9753: other biological processes ->response to jasmonic acid
(P) 9793: developmental processes ->embryo development ending in seed dormancy
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 8 9
soybean 1 16 17
rice 1 5 6
sorghum 3 3 6
physcomitrella 1 5 6
Total 7 37 44
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
PKWNDDLDLKLENAFD at 240/291 in soybean Gm010412 (Type III)
NNDDYDLGLQLENAFD at 244/295 in soybean Gm015354 (Type III)
NNDDYDLGLQLENAFD at 214/265 in soybean Gm015355 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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