fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G60480 (ATHB26, ZHD12)

Alias ATHB26, ZHD12
TF Classification
FioreDBZF_HD (Click to show phylogenetic tree)
RARTF
AtTFDBZF-HD
PlnTFDBzf-HD (v3.0), zf-HD (v1.0)
DATFZF-HD
TAIR short description ZINC FINGER HOMEODOMAIN 12, homeobox protein 26 (.1)
TAIR annotation homeobox protein 26 (HB26); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: zinc finger homeodomain 1 (TAIR:AT1G69600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT5G60480.1 0
Entry clone (w/o stop) IE_0032
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 46872: other binding ->metal ion binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice
sorghum
physcomitrella
Total 2 2
Repression motif 
TTSSMSLNLKL at 185/191 in AT5G60480.1
Repression motif
in putative orthologs
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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