Alias |
RSM3, ATRL6 |
TF Classification |
FioreDB | MYB (Click to show phylogenetic tree) |
RARTF | |
AtTFDB | |
PlnTFDB | MYB-related (v3.0), MYB-related (v1.0) |
DATF | |
|
TAIR short description |
RADIALIS-LIKE SANT/MYB 3, RAD-like 6 (.1.2) |
TAIR annotation |
RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 590 Blast hits to 589 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_01C07 |
External link |
|
Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(C) 9507: chloroplast |
->chloroplast |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
|
2 |
6 |
8 |
soybean |
1 |
|
|
9 |
10 |
rice |
|
|
|
|
|
sorghum |
|
1 |
|
|
1 |
physcomitrella |
|
|
|
|
|
Total |
1 |
1 |
2 |
15 |
19 |
|
Repression motif |
|
Repression motif in putative orthologs |
EKRLRNLNLNLQ at 91/97 in soybean Gm006862 (Type III)
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
View all photo |
abnormal stem (direct input)
  |
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
ID50073 |
Torenia |
35S:AtCDS-SRDX |
2008-10-01 |
development bulk, 12 lines  |
no phenotype  |
  |
|
Comment |
|