Alias |
ATHB31, ZHD4 |
TF Classification |
FioreDB | ZF_HD (Click to show phylogenetic tree) |
RARTF | |
AtTFDB | ZF-HD |
PlnTFDB | zf-HD (v3.0), zf-HD (v1.0) |
DATF | ZF-HD |
|
TAIR short description |
ZINC FINGER HOMEODOMAIN 4, homeobox protein 31 (.1.2) |
TAIR annotation |
homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 602 Blast hits to 562 proteins in 67 species: Archae - 0; Bacteria - 10; Metazoa - 45; Fungi - 3; Plants - 505; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_03G03 |
External link |
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Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 42803: protein binding |
->protein homodimerization activity |
(F) 46872: other binding |
->metal ion binding |
(P) 48574: response to abiotic or biotic stimulus |
->long-day photoperiodism, flowering |
(F) 5515: protein binding |
->protein binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
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miRNA/tasiRNA |
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Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
|
1 |
2 |
3 |
soybean |
|
|
1 |
1 |
2 |
rice |
|
|
1 |
|
1 |
sorghum |
|
|
1 |
1 |
2 |
physcomitrella |
|
|
1 |
|
1 |
Total |
|
|
5 |
4 |
9 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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