fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G40220 (ATABI4, GIN6, SUN6, SIS5, SAN5, ISI3, ABI4)

Alias ATABI4, GIN6, SUN6, SIS5, SAN5, ISI3, ABI4
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFAP2/EREBP / ABSCISIC ACID-INSENSITIVE4
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description SUCROSE UNCOUPLED 6, SUGAR-INSENSITIVE 5, SALOBRENO 5, IMPAIRED SUCROSE INDUCTION 3, GLUCOSE INSENSITIVE 6, ABA INSENSITIVE 4, Integrase-type DNA-binding superfamily protein (.1)
TAIR annotation Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings. (.1)
Gene model
Gene model cDNA support
AT2G40220.1 4
Entry clone (w/o stop) IE_08C09
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10119: other cellular processes ->regulation of stomatal movement
(P) 10182: signal transduction ->sugar mediated signaling pathway
(P) 10353: other biological processes ->response to trehalose
(P) 10449: developmental processes ->root meristem growth
(P) 10896: other metabolic processes ->regulation of triglyceride catabolic process
(P) 31930: signal transduction ->mitochondria-nucleus signaling pathway
(P) 32880: other biological processes ->regulation of protein localization
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 45893: transcription,DNA-dependent ->positive regulation of transcription, DNA-templated
(P) 48316: developmental processes ->seed development
(P) 48527: developmental processes ->lateral root development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 5983: other cellular processes ->starch catabolic process
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 6952: response to stress ->defense response
(P) 6970: response to abiotic or biotic stimulus ->response to osmotic stress
(P) 9414: response to stress ->response to water deprivation
(P) 9738: other cellular processes ->abscisic acid-activated signaling pathway
(P) 9744: other biological processes ->response to sucrose
(P) 9747: signal transduction ->hexokinase-dependent signaling
(P) 9749: other biological processes ->response to glucose
(P) 9873: signal transduction ->ethylene-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean
rice 1 1
sorghum 1 1
physcomitrella
Total 3 3
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

         no visible phenotype (direct input)
        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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