fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G23220 (ESE1)

Alias ESE1
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFPti5
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description ethylene and salt inducible 1, Integrase-type DNA-binding superfamily protein (.1)
TAIR annotation encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. (.1)
Gene model
Gene model cDNA support
AT3G23220.1 5
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5622: other intracellular components ->intracellular
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9873: signal transduction ->ethylene-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 3 25 28
soybean 1 42 43
rice 1 7 8
sorghum 1 8 9
physcomitrella 1 9 10
Total 7 91 98
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
RGAAGRLRLRLAARRL at 97/483 in sorghum Sb029723 (Type III)
EPKDELDLEAEPIKLVQ at 101/262 in poplar Pt031219 (Type III)
LINLVSLSLNLFFEFF at 309/346 in sorghum Sb021151 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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