fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G25160 (ZFP3)

Alias ZFP3
TF Classification
FioreDBC2H2ZnF (Click to show phylogenetic tree)
RARTFC2H2(Zn) / InterPro C2H2
AtTFDBC2H2
PlnTFDBC2H2 (v3.0), C2H2 (v1.0)
DATFC2H2
TAIR short description zinc finger protein 3 (.1)
TAIR annotation Encodes a zinc finger protein containing only a single zinc finger. (.1)
Gene model
Gene model cDNA support
AT5G25160.1 8
Entry clone (w/o stop) RE_03G06_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3676: nucleic acid binding ->nucleic acid binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(F) 46872: other binding ->metal ion binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(F) 8270: other binding ->zinc ion binding
(P) 9738: other cellular processes ->abscisic acid-activated signaling pathway
(P) 9788: other cellular processes ->negative regulation of abscisic acid-activated signaling pathway
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice
sorghum
physcomitrella
Total 2 2
Repression motif 
HEEQQKLDLSLKL at 227/235 in AT5G25160.1
Repression motif
in putative orthologs		 
QDDLQKLDLSLKL at 279/286 in poplar Pt030824 (Type Ib)
QEEMKHLDLSLKL at 274/281 in soybean Gm009089 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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