Alias |
|
TF Classification |
|
TAIR short description |
C2H2-like zinc finger protein (.1) |
TAIR annotation |
C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_1144_x |
External link |
|
Gene Ontology (GO) |
(C) 16021: other membranes |
->integral component of membrane |
(F) 3676: nucleic acid binding |
->nucleic acid binding |
(F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
(F) 8270: other binding |
->zinc ion binding |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
|
1 |
2 |
soybean |
1 |
|
2 |
|
3 |
rice |
1 |
|
|
|
1 |
sorghum |
1 |
|
|
|
1 |
physcomitrella |
1 |
|
1 |
|
2 |
Total |
5 |
|
3 |
1 |
9 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
Comment |
|