fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G13600 (ATBZIP58)

Alias ATBZIP58
TF Classification
FioreDBbZIP (Click to show phylogenetic tree)
RARTFbZIP / PERIANTHIA
AtTFDBbZIP
PlnTFDBbZIP (v3.0), bZIP (v1.0)
DATFbZIP
TAIR short description basic leucine-zipper 58 (.1)
TAIR annotation basic leucine-zipper 58 (bZIP58); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 48 (TAIR:AT2G04038.1); Has 2046 Blast hits to 2038 proteins in 142 species: Archae - 0; Bacteria - 6; Metazoa - 51; Fungi - 55; Plants - 1834; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT1G13600.1 8
Entry clone (w/o stop) RE_0306_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42803: protein binding ->protein homodimerization activity
(F) 46982: protein binding ->protein heterodimerization activity
(C) 5634: nucleus ->nucleus
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 3 4
rice
sorghum
physcomitrella
Total 1 2 3 6
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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