fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G15050 (IAA34)

Alias IAA34
TF Classification
FioreDBAUX_IAA (Click to show phylogenetic tree)
RARTFAux/IAA
AtTFDB
PlnTFDBAUX/IAA (v3.0), AUX/IAA (v1.0)
DATFAUX-IAA
TAIR short description indole-3-acetic acid inducible 34 (.1)
TAIR annotation Belongs to auxin inducible gene family. (.1)
Gene model
Gene model cDNA support
AT1G15050.1 7
Entry clone (w/o stop) IE_01F01
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 9733: other biological processes ->response to auxin
(P) 9734: signal transduction ->auxin-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1 2
rice
sorghum
physcomitrella
Total 1 1 1 3
Repression motif 
FGGVIDLGLSLRTIQH at 61/185 in AT1G15050.1
Repression motif
in putative orthologs		 
DDGIIDLGLSLGTVRH at 30/190 in soybean Gm054444 (Type II)
HGGYSSLALQLEDMFG at 118/190 in soybean Gm054444 (Type II)
DDGIIDLGLSLRTLKP at 30/160 in poplar Pt034740 (Type Ia)
HGGYSSLALQLEDMFG at 88/160 in poplar Pt034740 (Type Ia)
DDGIIDLGLSLGTVQH at 30/191 in soybean Gm029002 (Type III)
HGGYSSLALQLEDMFG at 119/191 in soybean Gm029002 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> no transformant(2011.3.10AKITA)
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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