fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G78700 (BEH4)

Alias BEH4
TF Classification
FioreDBBZR (Click to show phylogenetic tree)
RARTF
AtTFDBBZR
PlnTFDBBES1 (v3.0), BES1 (v1.0)
DATFBES1
TAIR short description BES1/BZR1 homolog 4 (.1)
TAIR annotation BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT1G78700.1 40
Entry clone (w/o stop) IE_06B11
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9742: signal transduction ->brassinosteroid mediated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 5 6
soybean 1 5 6
rice 1 2 3
sorghum 1 1 2
physcomitrella 1 1
Total 4 1 13 18
Repression motif 
ESGSDDLELTLGNSST at 313/325 in AT1G78700.1
Repression motif
in putative orthologs		 
SFGTDDLELTLGSSKT at 319/334 in soybean Gm037329 (Type II)
ECVSDDLELTLGNSST at 243/254 in poplar Pt025437 (Type II)
ECASDELELTLGSSKT at 340/355 in rice Os025252 (Type II)
ECVSDDLELTLGNSNT at 320/331 in poplar Pt020395 (Type II)
ECGSDDLELTLGNSRT at 308/319 in poplar Pt026020 (Type II)
DSGSDDLELTLGSSRT at 351/365 in rice Os000898 (Type Ia)
EFGSDDLELTLGNSKT at 311/322 in soybean Gm034553 (Type II)
EFGSDDLELTLGNSKT at 314/325 in soybean Gm037328 (Type Ia)
ECGSDDLELTLGNSRT at 238/249 in poplar Pt012307 (Type II)
ECGSDDLELTLGNSRT at 317/328 in poplar Pt030017 (Type Ia)
ECGSDDLELTLGNSRT at 317/328 in poplar Pt030016 (Type II)
SFGTDDLELTLGSSKT at 319/330 in soybean Gm037331 (Type II)
ECGSDDLELTLGSSMT at 337/351 in rice Os007138 (Type II)
SFGTDDLELTLGSSKT at 319/334 in soybean Gm034552 (Type II)
SFGTDDLELTLGSSKT at 249/264 in soybean Gm037330 (Type II)
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment