fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G01200 (IAA32, MEE10)

Alias IAA32, MEE10
TF Classification
FioreDBAUX_IAA (Click to show phylogenetic tree)
RARTFAux/IAA
AtTFDB
PlnTFDBAUX/IAA (v3.0), AUX/IAA (v1.0)
DATFAUX-IAA
TAIR short description maternal effect embryo arrest 10, indole-3-acetic acid inducible 32 (.1.2)
TAIR annotation Belongs to auxin inducible gene family. (.1.2)
Gene model
Gene model cDNA support
AT2G01200.2 4
AT2G01200.1 1
Entry clone (w/o stop) IE_0044 IE_0045
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9555: developmental processes ->pollen development
(P) 9733: other biological processes ->response to auxin
(P) 9734: signal transduction ->auxin-activated signaling pathway
(P) 9793: developmental processes ->embryo development ending in seed dormancy
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1 2
rice
sorghum
physcomitrella
Total 1 2 3
Repression motif 
GGGVIDLGLSLRTIQH at 30/143 in AT2G01200.1
QGAYATLALQLNDMFD at 123/143 in AT2G01200.1
GGGVIDLGLSLRTIQH at 30/191 in AT2G01200.2
QGAYATLALQLNDMFG at 123/191 in AT2G01200.2
Repression motif
in putative orthologs		 
DDGIIDLGLSLGTVQH at 30/191 in soybean Gm029002 (Type II)
HGGYSSLALQLEDMFG at 119/191 in soybean Gm029002 (Type II)
DDGIIDLGLSLRTLKP at 30/160 in poplar Pt034740 (Type II)
HGGYSSLALQLEDMFG at 88/160 in poplar Pt034740 (Type II)
DDGIIDLGLSLGTVRH at 30/190 in soybean Gm054444 (Type Ia)
HGGYSSLALQLEDMFG at 118/190 in soybean Gm054444 (Type Ia)
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment