Alias |
NF-YA4 |
TF Classification |
|
TAIR short description |
"nuclear factor Y, subunit A4", nuclear factor Y, subunit A4 (.1) |
TAIR annotation |
"nuclear factor Y, subunit A4" (NF-YA4); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A7 (TAIR:AT1G30500.2); Has 682 Blast hits to 682 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 131; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_02A12 |
External link |
|
Gene Ontology (GO) |
(C) 16602: other intracellular components |
->CCAAT-binding factor complex |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(P) 45892: other metabolic processes |
->negative regulation of transcription, DNA-templated |
(P) 48510: other biological processes |
->regulation of timing of transition from vegetative to reproductive phase |
(F) 5515: protein binding |
->protein binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
|
1 |
2 |
3 |
soybean |
|
|
1 |
6 |
7 |
rice |
|
|
|
|
|
sorghum |
|
|
|
|
|
physcomitrella |
|
|
|
|
|
Total |
|
|
2 |
8 |
10 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
Comment |
|