fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G28500 (ANAC073, SND2, NST7)

Alias ANAC073, SND2, NST7
TF Classification
FioreDBNAC (Click to show phylogenetic tree)
RARTFNAC / CUP-SHAPED COTYLEDON2
AtTFDBNAC
PlnTFDBNAC (v3.0), NAC (v1.0)
DATFNAC
TAIR short description SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2, NAC domain containing protein 73 (.1)
TAIR annotation NAC domain containing protein 73 (NAC073); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 10 (TAIR:AT1G28470.1); Has 2322 Blast hits to 2317 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2321; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT4G28500.1 3
Entry clone (w/o stop) RE_01H09
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 2000652: other cellular processes ->regulation of secondary cell wall biogenesis
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 45893: other metabolic processes ->positive regulation of transcription, DNA-templated
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 7275: developmental processes ->multicellular organism development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 3 6 10
soybean 1 8 6 15
rice 1 3 4
sorghum 1 1 4 6
physcomitrella 1 1
Total 5 12 19 36
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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