fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G34990 (ATMYB32)

Alias ATMYB32
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / ATR1
AtTFDBMYB / R2R3-MYBs
PlnTFDBMYB (v3.0), MYB (v1.0)
DATFMYB
TAIR short description myb domain protein 32 (.1)
TAIR annotation Member of the R2R3 factor gene family. (.1)
Gene model
Gene model cDNA support
AT4G34990.1 15
Entry clone (w/o stop) RE_02H03_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 30154: other cellular processes ->cell differentiation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 46686: other biological processes ->response to cadmium ion
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 6357: other cellular processes ->regulation of transcription from RNA polymerase II promoter
(P) 9651: response to abiotic or biotic stimulus ->response to salt stress
(P) 9723: other biological processes ->response to ethylene
(P) 9737: other biological processes ->response to abscisic acid
(P) 9751: other biological processes ->response to salicylic acid
(P) 9753: other biological processes ->response to jasmonic acid
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 19 20
soybean 1 5 19 25
rice 1 10 11
sorghum 1 9 10
physcomitrella
Total 2 7 57 66
Repression motif 
VVEERCLDLNLELRIS at 181/274 in AT4G34990.1
Repression motif
in putative orthologs		 
SVPHHQLNLDLSIGLP at 210/302 in soybean Gm010386 (Type III)
EPRCPDLNLELSVGPT at 197/260 in rice Os021728 (Type III)
APRCPDLNLDLDLSVG at 194/269 in sorghum Sb009095 (Type III)
LLLLHQLQLQLSIIIA at 182/382 in soybean Gm035059 (Type III)
QERCPDLNLELRISLP at 186/268 in poplar Pt018632 (Type II)
HERCPDLNLELTISPP at 150/228 in soybean Gm013658 (Type II)
VHPNHKLNLELSIGLP at 220/318 in poplar Pt012921 (Type III)
PLKCPDLNLDLCISLP at 189/251 in rice Os034636 (Type III)
QCTLPDLNLDLTMSIP at 182/226 in poplar Pt034304 (Type III)
HERCPDLNLELTISPP at 157/235 in soybean Gm013657 (Type II)
PTSLPTLILFR at 239/244 in poplar Pt003372 (Type III)
SFPHHQLNLDLSIGLP at 203/301 in soybean Gm015390 (Type III)
LERCPDLNLELTISPP at 173/253 in soybean Gm032581 (Type Ia)
PPKCPDLNLDLCISPP at 161/243 in rice Os032444 (Type II)
GEKCQELNLELRICPP at 177/254 in poplar Pt000909 (Type III)
PCALPDLNLDLSITNP at 186/255 in soybean Gm019076 (Type III)
LERCPDLNLELTISPP at 170/246 in soybean Gm030520 (Type II)
EPRCPDLNLELSVGPT at 197/260 in rice Os021729 (Type III)
QERCPDLNLELRISLP at 186/266 in poplar Pt018633 (Type III)
LERCPDLNLELTISPP at 133/203 in soybean Gm008428 (Type II)
VPRCPDLNLDLCISPP at 216/452 in sorghum Sb031046 (Type Ia)
QERCPDLNLELGISLP at 189/271 in poplar Pt021128 (Type III)
APRCPDLNLDLDLDLS at 205/287 in rice Os004951 (Type III)
SCALPDLNLDLSICEK at 160/218 in soybean Gm053532 (Type III)
SSSINIDLNIAAPASPGH at 200/245 in poplar Pt019483 (Type III)
PSSLPTLLLFR at 240/245 in poplar Pt019483 (Type III)
GEKCQELNLELRICPP at 168/245 in poplar Pt000910 (Type III)
VVGGIDLNLSLSPPTS at 196/215 in sorghum Sb016715 (Type III)
LERCPDLNLELTISPP at 140/210 in soybean Gm008427 (Type II)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment