fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G37180

Alias
TF Classification
FioreDBGARP (Click to show phylogenetic tree)
RARTFGARP / G2-like
AtTFDBG2-like
PlnTFDBG2-like (v3.0), G2-like (v1.0)
DATFGARP-G2-like
TAIR short description Homeodomain-like superfamily protein (.1.2)
TAIR annotation myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen (.1), myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen (.2)
Gene model
Gene model cDNA support
AT4G37180.1 32
AT4G37180.2 21
Entry clone (w/o stop) RE_0874_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10629: other metabolic processes ->negative regulation of gene expression
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 48449: developmental processes ->floral organ formation
(C) 5634: nucleus ->nucleus
(C) 5829: cytosol ->cytosol
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 90701: developmental processes ->specification of plant organ identity
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice
sorghum
physcomitrella
Total 2 2
Repression motif 
TDQRMGLNLNLSIYSL at 10/363 in AT4G37180.2
TDQRMGLNLNLSIYSL at 10/356 in AT4G37180.1
Repression motif
in putative orthologs		 
MELSLDLSLVCEPK at 4/351 in poplar Pt036814 (Type Ib)
MELSLDLSLGFVPK at 4/329 in soybean Gm029962 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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