fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G44210 (AtERF9, ATERF-9)

Alias AtERF9, ATERF-9
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFERF
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description ERF DOMAIN PROTEIN- 9, erf domain protein 9 (.1)
TAIR annotation encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. (.1)
Gene model
Gene model cDNA support
AT5G44210.1 10
Entry clone (w/o stop) RE_04B03_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(C) 16020: other membranes ->membrane
(P) 19760: other cellular processes ->glucosinolate metabolic process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 45892: other metabolic processes ->negative regulation of transcription, DNA-templated
(C) 5622: other intracellular components ->intracellular
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 6952: response to stress ->defense response
(P) 9873: other cellular processes ->ethylene-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice 1 1
sorghum
physcomitrella
Total 3 3
Repression motif 
VEPRRELNLDLNLAPP at 185/200 in AT5G44210.1
Repression motif
in putative orthologs		 
PRRSVLDLDLNLPPPLDA at 201/213 in poplar Pt004210 (Type Ib)
CQPKRELNLDLNLAPP at 195/208 in soybean Gm016536 (Type Ib)
MPIPPSLELDLFHRAA at 133/236 in rice Os022250 (Type Ib)
KKAIAFDLDLNCPPPMEV at 224/236 in rice Os022250 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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