fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G67411

Alias
TF Classification
FioreDBGRAS (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDBGRAS (v3.0), GRAS (v1.0)
DATFGRAS
TAIR short description GRAS family transcription factor (.1)
TAIR annotation GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 1527 Blast hits to 1517 proteins in 214 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1525; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT5G67411.1 51
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1 2
rice 1 1
sorghum 1 1
physcomitrella
Total 4 2 6
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
PHAAGGLGLGLFLDVG at 18/455 in sorghum Sb006681 (Type II)
HPNGHGLGLGLYLDVG at 20/473 in rice Os028854 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> 

          
Plasmid construction -> 

          
Transformed -> 

          
T1 seed harvested -> 

          
T2 seed harvested -> 

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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