fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G25490 (DREB1B, CBF1, ATCBF1)

Alias DREB1B, CBF1, ATCBF1
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFAP2/EREBP / CBF1
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description DRE BINDING PROTEIN 1B, C-repeat/DRE binding factor 1 (.1)
TAIR annotation Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid. (.1)
Gene model
Gene model cDNA support
AT4G25490.1 42
Entry clone (w/o stop) RE_0107
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45893: other cellular processes ->positive regulation of transcription, DNA-templated
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 9409: response to stress ->response to cold
(P) 9414: response to abiotic or biotic stimulus ->response to water deprivation
(P) 9631: response to stress ->cold acclimation
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 2 2 4
soybean 1 1 2
rice
sorghum
physcomitrella
Total 3 3 6
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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