fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G57420 (IAA33)

Alias IAA33
TF Classification
FioreDBAUX_IAA (Click to show phylogenetic tree)
RARTFARF / NPH4/ARF7
AtTFDB
PlnTFDB
DATFAUX-IAA
TAIR short description indole-3-acetic acid inducible 33 (.1)
TAIR annotation Belongs to auxin inducible gene family. (.1)
Gene model
Gene model cDNA support
AT5G57420.1 2
Entry clone (w/o stop) IE_01F03
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9733: other biological processes ->response to auxin
(P) 9734: other cellular processes ->auxin-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean
rice 1 1
sorghum
physcomitrella
Total 2 1 3
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
SDSVSDLDLDLSNAIP at 116/175 in poplar Pt009547 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

          Comment