fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G65410 (ATHB25, ZFHD2, ZHD1)

Alias ATHB25, ZFHD2, ZHD1
TF Classification
FioreDBZF_HD (Click to show phylogenetic tree)
RARTFC2H2(Zn) / InterPro C2H2
AtTFDBZF-HD
PlnTFDBzf-HD (v3.0), zf-HD (v1.0)
DATFZF-HD
TAIR short description ZINC FINGER HOMEODOMAIN 1, ZINC FINGER HOMEODOMAIN 2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25, homeobox protein 25 (.1)
TAIR annotation Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family. (.1)
Gene model
Gene model cDNA support
AT5G65410.1 22
Entry clone (w/o stop) RE_02F03_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10371: other metabolic processes ->regulation of gibberellin biosynthetic process
(P) 10431: developmental processes ->seed maturation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 46872: other binding ->metal ion binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 6 7
soybean 1 12 13
rice 1 1
sorghum 1 1 2
physcomitrella 1 5 6
Total 1 4 24 29
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> no transformant(2012.2.24AKITA)

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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