fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G74500 (TMO7, PRE3, ATBS1, bHLH135)

Alias TMO7, PRE3, ATBS1, bHLH135
TF Classification
FioreDBbHLH (Click to show phylogenetic tree)
RARTFbHLH / checked group
AtTFDBbHLH
PlnTFDBbHLH (v3.0), bHLH (v1.0)
DATFbHLH
TAIR short description TARGET OF MONOPTEROS 7, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 (.1)
TAIR annotation Encodes a basic helixloophelix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane. (.1)
Gene model
Gene model cDNA support
AT1G74500.1 17
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10086: developmental processes ->embryonic root morphogenesis
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 40008: other biological processes ->regulation of growth
(F) 46983: protein binding ->protein dimerization activity
(P) 48364: developmental processes ->root development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9740: other cellular processes ->gibberellic acid mediated signaling pathway
(P) 9742: signal transduction ->brassinosteroid mediated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 2 3
soybean 1 1 8 10
rice 1 1 2
sorghum 1 1 2
physcomitrella
Total 2 3 12 17
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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