fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G17600 (IAA31)

Alias IAA31
TF Classification
FioreDBAUX_IAA (Click to show phylogenetic tree)
RARTFARF / NPH4/ARF7
AtTFDB
PlnTFDBAUX/IAA (v3.0), AUX/IAA (v1.0)
DATFAUX-IAA
TAIR short description indole-3-acetic acid inducible 31 (.1)
TAIR annotation Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA31 shares several residues with the conserved domain II region, believed to act as a degron in many of the rapidly degraded Aux/IAA family members. An IAA31 fusion protein is quite long-lived, but can be degraded more rapidly in the presence of auxin. Unlike many other family members, IAA31 transcript levels do not rise in response to auxin. Nevertheless, overexpression of IAA31 leads to defects in auxin-related processes such as gravitropism, root development, shoot development, and cotyledon vascular development. (.1)
Gene model
Gene model cDNA support
AT3G17600.1 9
Entry clone (w/o stop) RE_01D02
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 48364: developmental processes ->root development
(P) 48367: developmental processes ->shoot system development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9630: response to abiotic or biotic stimulus ->gravitropism
(P) 9733: other biological processes ->response to auxin
(P) 9734: other cellular processes ->auxin-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 16 17
soybean 1 2 28 31
rice 2 5 7
sorghum 1 1
physcomitrella
Total 2 5 49 56
Repression motif
SESSVNLSLSLTFPST at 27/158 in AT3G17600.1
Repression motif
in putative orthologs
NLKATELRLGLPGFQS at 72/354 in soybean Gm025446 (Type III)
TDLSTDLRLGLSISPS at 119/260 in soybean Gm045965 (Type II)
NFEETELRLGLPGNDS at 8/227 in soybean Gm055526 (Type III)
ETASVDLKLNLSSCIN at 36/227 in soybean Gm055526 (Type III)
NLKATELRLGLPGTED at 17/248 in soybean Gm002569 (Type III)
CPEESELELGLGLSLS at 24/291 in soybean Gm035802 (Type III)
NLEATELRLGLPGTAT at 13/201 in poplar Pt001236 (Type III)
GFEETELRLGLPGNGG at 15/237 in poplar Pt039463 (Type III)
FSETVDLKLKLSSKES at 42/237 in poplar Pt039463 (Type III)
NLKATELRLGLPGSQS at 72/366 in poplar Pt039771 (Type III)
QQLPTDLRLGLGISAT at 35/180 in soybean Gm007900 (Type III)
VDVGTELRLGLPGGGG at 11/236 in rice Os014857 (Type III)
FEETIDLKLKLPTAGM at 40/236 in rice Os014857 (Type III)
YNSYKDLSLALQKMFG at 157/236 in rice Os014857 (Type III)
SLISTDLRLGLTLSSV at 57/205 in rice Os009627 (Type II)
YPVEAELELGLGLSLG at 42/303 in poplar Pt034335 (Type III)
YPVEAELELGLSLGSG at 43/282 in poplar Pt041570 (Type III)
VDVGTELRLGLPGGGG at 11/236 in rice Os014856 (Type III)
FEETIDLKLKLPTAGM at 40/236 in rice Os014856 (Type III)
YNSYKDLSLALQKMFG at 157/236 in rice Os014856 (Type III)
NLKATELRLGLPGLQS at 72/367 in soybean Gm040251 (Type III)
RFEETELRLGLPGNGG at 15/229 in poplar Pt001265 (Type III)
FSETVDLKLNLSSKEG at 44/229 in poplar Pt001265 (Type III)
NLKATELRLGLPGTEE at 18/194 in soybean Gm055370 (Type III)
NLDATELRLGLPGTAT at 13/203 in poplar Pt015555 (Type III)
NLKATELRLGLPGSQS at 72/366 in soybean Gm004719 (Type III)
NLKATELRLGLPGSQS at 72/366 in soybean Gm004717 (Type III)
QELPTDLRLGLGISAT at 35/158 in soybean Gm052950 (Type III)
GLEITELRLGLPDAEH at 12/195 in soybean Gm022022 (Type III)
HKGYSDLALALDKLFG at 112/195 in soybean Gm022022 (Type III)
SPDEGELELGLGLSLG at 39/289 in poplar Pt040422 (Type III)
RDLSTDLRLGLGISTS at 37/174 in poplar Pt039254 (Type III)
NLKATELRLGLPGSQS at 41/315 in soybean Gm001067 (Type III)
NLKATELRLGLPGFQS at 72/348 in soybean Gm025447 (Type III)
GLEITELRLGLPDAEH at 12/187 in soybean Gm017314 (Type III)
HKGYSDLALALDKLFG at 104/187 in soybean Gm017314 (Type III)
NLKATELRLGLPGSQS at 77/359 in soybean Gm000355 (Type III)
EARGPRLTLRLGLPGS at 41/271 in rice Os003217 (Type III)
NLKATELRLGLPGSQS at 72/366 in soybean Gm004720 (Type III)
TDLSTDLRLGLSISPS at 119/243 in soybean Gm045966 (Type II)
RFEETELRLGLPGNGG at 15/237 in poplar Pt001264 (Type III)
FSETVDLKLNLSSKEG at 44/237 in poplar Pt001264 (Type III)
MELELGLRLALPSPSP at 6/183 in rice Os023743 (Type II)
SPDEGELELGLGLSLG at 39/290 in poplar Pt040421 (Type III)
NLKATELRLGLPGSQS at 77/359 in soybean Gm000353 (Type III)
YPVEAELELGLGLSLG at 42/277 in poplar Pt034336 (Type III)
NLKETELRLGLPGTGC at 17/207 in poplar Pt040947 (Type III)
NFEETELRLGLPLSGN at 17/243 in soybean Gm008159 (Type III)
SDTAVDLKLNLSSTSN at 47/243 in soybean Gm008159 (Type III)
NLKATELRLGLPGTSC at 122/297 in poplar Pt035517 (Type III)
MELQLGLSLPTYNF at 4/229 in poplar Pt005005 (Type III)
TDLSTDLRLGLSISPS at 103/244 in soybean Gm035692 (Type Ia)
NLKATELRLGLPGSQS at 77/359 in soybean Gm000354 (Type III)
CPEESELELGLGLSLS at 24/287 in soybean Gm026737 (Type III)
QELPTDLRLGLGISAT at 35/177 in soybean Gm052949 (Type III)
NLKATELRLGLPGSQS at 74/350 in soybean Gm022673 (Type III)
DDLSTDLQLGLSLSPA at 43/193 in sorghum Sb007705 (Type Ia)
DHLRTDLRLGLSISTT at 40/180 in soybean Gm002637 (Type III)
NLKETELRLGLPGTGC at 17/226 in poplar Pt040946 (Type III)
NLKATELRLGLPGFQS at 72/347 in soybean Gm025448 (Type III)
NLKATELRLGLPGSQS at 72/360 in soybean Gm009377 (Type III)
EARGPRLTLRLGLPGS at 41/271 in rice Os003218 (Type III)
KDLSTDLRLGLSISTS at 37/175 in poplar Pt016750 (Type II)

        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> no transformant(2011.3.11AKITA)
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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