fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G50410 (OBP1, AtDof3. 4)

Alias OBP1, AtDof3. 4
TF Classification
FioreDBDOF (Click to show phylogenetic tree)
RARTFC2C2(Zn) / Dof
AtTFDBC2C2-Dof
PlnTFDBC2C2-Dof (v3.0), C2C2-Dof (v1.0)
DATFC2C2-Dof
TAIR short description OBF binding protein 1 (.1)
TAIR annotation Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development. (.1)
Gene model
Gene model cDNA support
AT3G50410.1 15
Entry clone (w/o stop) RE_0479
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 42545: other cellular processes ->cell wall modification
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 45787: other cellular processes ->positive regulation of cell cycle
(P) 45893: transcription,DNA-dependent ->positive regulation of transcription, DNA-templated
(F) 46872: other binding ->metal ion binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 9733: other biological processes ->response to auxin
(P) 9751: other biological processes ->response to salicylic acid
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1 2
rice
sorghum
physcomitrella
Total 2 2 4
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        slender cotyledon

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         meristem-less, 
         root-less, 
         thickened cotyledon 
         (A20350-1001)
         


        		
       

       

        Phenotype in ornamental plants


        
         

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