Alias |
COL4, ATCOL4 |
TF Classification |
|
TAIR short description |
CONSTANS-like 4 (.1) |
TAIR annotation |
CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_04F04_x |
External link |
|
Gene Ontology (GO) |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
(F) 8270: other binding |
->zinc ion binding |
(P) 9416: response to abiotic or biotic stimulus |
->response to light stimulus |
(P) 9909: developmental processes |
->regulation of flower development |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
1 |
2 |
4 |
soybean |
1 |
|
1 |
2 |
4 |
rice |
|
|
|
|
|
sorghum |
|
|
|
|
|
physcomitrella |
|
1 |
|
|
1 |
Total |
2 |
1 |
2 |
4 |
9 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
|
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Comment |
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