fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G71930 (VND7, ANAC030)

Alias VND7, ANAC030
TF Classification
FioreDBNAC (Click to show phylogenetic tree)
RARTFNAC / CUP-SHAPED COTYLEDON2
AtTFDBNAC
PlnTFDBNAC (v3.0), NAC (v1.0)
DATFNAC
TAIR short description Arabidopsis NAC domain containing protein 30, vascular related NAC-domain protein 7 (.1)
TAIR annotation Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. (.1)
Gene model
Gene model cDNA support
AT1G71930.1 5
Entry clone (w/o stop) RE_0606
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10089: other biological processes ->xylem development
(P) 10628: other metabolic processes ->positive regulation of gene expression
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42802: protein binding ->identical protein binding
(F) 42803: protein binding ->protein homodimerization activity
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 45491: other cellular processes ->xylan metabolic process
(P) 45893: other cellular processes ->positive regulation of transcription, DNA-templated
(F) 46982: protein binding ->protein heterodimerization activity
(P) 48759: other cellular processes ->xylem vessel member cell differentiation
(P) 50832: response to abiotic or biotic stimulus ->defense response to fungus
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 71365: other cellular processes ->cellular response to auxin stimulus
(P) 71555: other cellular processes ->cell wall organization
(P) 7275: developmental processes ->multicellular organism development
(P) 90059: other biological processes ->protoxylem development
(P) 9620: response to abiotic or biotic stimulus ->response to fungus
(P) 9733: other biological processes ->response to auxin
(P) 9735: other biological processes ->response to cytokinin
(P) 9737: other biological processes ->response to abscisic acid
(P) 9741: other biological processes ->response to brassinosteroid
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1 1 3
rice 1 1
sorghum 1 1
physcomitrella 1 1
Total 2 3 2 1 8
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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