fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G27730 (ZAT10, STZ)

Alias ZAT10, STZ
TF Classification
FioreDBC2H2ZnF (Click to show phylogenetic tree)
RARTFC2H2(Zn) / InterPro C2H2
AtTFDBC2H2
PlnTFDBC2H2 (v3.0), C2H2 (v1.0)
DATFC2H2
TAIR short description salt tolerance zinc finger (.1)
TAIR annotation Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. (.1)
Gene model
Gene model cDNA support
AT1G27730.1 132
Entry clone (w/o stop) RE_03G04_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10117: response to abiotic or biotic stimulus ->photoprotection
(P) 10200: other biological processes ->response to chitin
(P) 15979: other metabolic processes ->photosynthesis
(P) 35264: other biological processes ->multicellular organism growth
(F) 3676: nucleic acid binding ->nucleic acid binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 45892: transcription,DNA-dependent ->negative regulation of transcription, DNA-templated
(C) 5634: nucleus ->nucleus
(P) 6979: response to stress ->response to oxidative stress
(F) 8270: other binding ->zinc ion binding
(P) 9409: response to abiotic or biotic stimulus ->response to cold
(P) 9414: response to stress ->response to water deprivation
(P) 9611: response to stress ->response to wounding
(P) 9644: response to abiotic or biotic stimulus ->response to high light intensity
(P) 9651: response to stress ->response to salt stress
(P) 9737: other biological processes ->response to abscisic acid
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 2 1 4
soybean 1 3 4
rice
sorghum 1 1
physcomitrella
Total 2 1 5 1 9
Repression motif 
SSHRGFDLNIPPIPEFS at 188/227 in AT1G27730.1
Repression motif
in putative orthologs		 
SGKKPRLTLSLQKEKT at 235/250 in poplar Pt020831 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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