fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G26945 (KDR, PRE6)

Alias KDR, PRE6
TF Classification
FioreDBbHLH (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDB
DATF
TAIR short description KIDARI, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)
TAIR annotation Encodes a basic helix-loop-helix (bHLH) protein involved in blue/far-red light signaling. Physically interacts with HFR1 and negatively regulates its activity. (.1)
Gene model
Gene model cDNA support
AT1G26945.1 22
Entry clone (w/o stop) IE_06E02
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 40008: other biological processes ->regulation of growth
(F) 46983: protein binding ->protein dimerization activity
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 9416: response to abiotic or biotic stimulus ->response to light stimulus
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 2 3
soybean 1 7 2 10
rice 1 4 5
sorghum 1 1 1 3
physcomitrella
Total 3 13 5 21
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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