fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G13080 (ATWRKY75, WRKY75)

Alias ATWRKY75, WRKY75
TF Classification
FioreDBWRKY (Click to show phylogenetic tree)
RARTFWRKY(Zn)
AtTFDBWRKY
PlnTFDBWRKY (v3.0), WRKY (v1.0)
DATFWRKY
TAIR short description ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY DNA-binding protein 75 (.1)
TAIR annotation WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation. (.1)
Gene model
Gene model cDNA support
AT5G13080.1 27
Entry clone (w/o stop) RE_0783_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10055: developmental processes ->atrichoblast differentiation
(F) 1046: DNA or RNA binding ->core promoter sequence-specific DNA binding
(P) 122: other metabolic processes ->negative regulation of transcription from RNA polymerase II promoter
(P) 32107: other biological processes ->regulation of response to nutrient levels
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 43620: response to stress ->regulation of DNA-templated transcription in response to stress
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 48527: developmental processes ->lateral root development
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 4 20 25
soybean 1 3 30 34
rice 1 10 11
sorghum 1 11 12
physcomitrella 1 1 2
Total 4 8 72 84
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
ANAFDALGLGLLQPPS at 306/543 in sorghum Sb033068 (Type III)
HLQGYNLTLSLPSSSD at 264/303 in poplar Pt040780 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> no transformant(2011.6.23AKITA)

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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