fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G39860 (BNQ1, BHLH136, PRE1)

Alias BNQ1, BHLH136, PRE1
TF Classification
FioreDBbHLH (Click to show phylogenetic tree)
RARTFbHLH / checked group
AtTFDBbHLH
PlnTFDB
DATF
TAIR short description PACLOBUTRAZOL RESISTANCE1, BANQUO 1, BASIC HELIX-LOOP-HELIX PROTEIN 136, basic helix-loop-helix (bHLH) DNA-binding family protein (.1)
TAIR annotation Encodes PRE1 (PACLOBUTRAZOL RESISTANCE1). PRE1 and IBH1 form a pair of antagonistic HLH/bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation. BNQ1 is directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time. (.1)
Gene model
Gene model cDNA support
AT5G39860.1 20
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 40008: other biological processes ->regulation of growth
(F) 46983: protein binding ->protein dimerization activity
(P) 48510: other biological processes ->regulation of timing of transition from vegetative to reproductive phase
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 9640: response to abiotic or biotic stimulus ->photomorphogenesis
(P) 9740: signal transduction ->gibberellic acid mediated signaling pathway
(P) 9741: other biological processes ->response to brassinosteroid
(P) 9742: signal transduction ->brassinosteroid mediated signaling pathway
(P) 9826: other cellular processes ->unidimensional cell growth
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 1 3
soybean 1 9 10
rice 1 4 5
sorghum 1 2 3
physcomitrella
Total 1 4 16 21
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> not_yet

          
Plasmid construction -> not_yet

          
Transformed -> not_yet

          
T1 seed harvested -> not_yet

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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